Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 CROCCP4-201ENST00000457096 498 ntBASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 RRP7BP-205ENST00000566851 833 ntBASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 MIR6775-201ENST00000617557 69 ntBASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 AL033527.5-201ENST00000641382 801 ntBASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 AC012617.1-204ENST00000586340 2305 ntBASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM55Q9BYV6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 KRT18P64-201ENST00000434946 1219 ntBASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 KRT18P43-201ENST00000469825 1281 ntBASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 RARRES2P5-201ENST00000564013 466 ntBASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AL033527.4-201ENST00000641026 673 ntBASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AC020910.6-201ENST00000623084 1459 ntBASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM55Q9BYV6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms