Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 AC005740.1-201ENST00000515639 522 ntBASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 KLF17P1-201ENST00000547105 1126 ntBASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 AC145285.5-201ENST00000562217 361 ntBASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 AC006483.2-201ENST00000609813 515 ntBASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CCT8L1P-201ENST00000465400 1674 ntBASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 DDX39AP1-201ENST00000445147 1181 ntBASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 FAM86KP-201ENST00000509817 987 ntBASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 AC006548.2-201ENST00000605217 529 ntBASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 AC091769.1-201ENST00000619576 568 ntBASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 AL354702.1-201ENST00000442006 1960 ntBASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.42■□□□□ 0.38
RTFDC1Q9BY42 AC019109.1-201ENST00000401725 1874 ntBASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 KRT18P46-201ENST00000435568 1279 ntBASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 GRPEL2P1-201ENST00000453145 339 ntBASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 CYP4F36P-201ENST00000589193 186 ntBASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 PEBP1P2-201ENST00000603980 558 ntBASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.41■□□□□ 0.38
RTFDC1Q9BY42 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms