Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 RARRES2P9-201ENST00000565168 469 ntBASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SEC22CQ9BRL7 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 LINC02486-201ENST00000604157 3000 ntBASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 AC015922.1-201ENST00000421102 1152 ntBASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 SPCS2P4-201ENST00000436160 681 ntBASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 MIR7706-201ENST00000613747 67 ntBASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 AC112176.1-201ENST00000565428 3024 ntBASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SEC22CQ9BRL7 TUBB8P4-201ENST00000511806 1324 ntBASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AC027369.3-201ENST00000530465 3707 ntBASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AL353705.2-201ENST00000428243 662 ntBASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms