Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 MIR943-201ENST00000401286 94 ntBASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 SPDYE18-201ENST00000510091 1050 ntBASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AC022616.1-201ENST00000518688 554 ntBASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 DUX4L47-201ENST00000566374 394 ntBASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 AC012617.1-204ENST00000586340 2305 ntBASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMSS1Q9BQ75 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 SALL4P5-201ENST00000419001 1760 ntBASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMSS1Q9BQ75 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AL136172.1-201ENST00000598590 1394 ntBASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 TCAM1P-207ENST00000485295 1537 ntBASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 TSSK5P-201ENST00000423978 907 ntBASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 RN7SL399P-201ENST00000471648 279 ntBASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
CMSS1Q9BQ75 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms