Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AL590440.2-201ENST00000641973 1595 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AC087481.3-201ENST00000602886 1894 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SIRPB3P-201ENST00000340424 1216 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 ALG1L7P-201ENST00000502317 768 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AC095040.1-201ENST00000513286 675 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 ACTBP9-201ENST00000587663 1099 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AL121949.1-201ENST00000402043 968 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SAP18P2-201ENST00000434334 459 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AC133141.1-201ENST00000443015 339 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 KRT8P1-201ENST00000557533 1207 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 U73169.1-201ENST00000395152 367 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 AL627095.1-201ENST00000414775 321 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 KRT18P44-201ENST00000416086 1285 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 ACY3-202ENST00000529256 933 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 STK24P1-201ENST00000455035 1291 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 SRP14-208ENST00000560773 468 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 AC106782.5-201ENST00000616011 337 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CICP24-201ENST00000605464 2705 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 TCAF2P1-201ENST00000291129 2421 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 MED15P3-201ENST00000413613 326 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 DPY19L2P4-201ENST00000479881 442 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 AC008026.2-201ENST00000495438 348 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CES1P2-201ENST00000566467 1242 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms