Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC083964.2-201ENST00000623988 2396 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 YBX2P1-201ENST00000394192 760 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 SPDYE17-201ENST00000412399 783 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 AL592309.1-201ENST00000443127 649 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 FAM197Y3-203ENST00000618346 717 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 AC084121.4-201ENST00000641598 221 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 AF228730.8-201ENST00000642140 221 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.14□□□□□ -0.63
AP1S3Q96PC3 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.14□□□□□ -0.63
AP1S3Q96PC3 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AC069335.1-201ENST00000489972 472 ntBASIC11.13□□□□□ -0.63
AP1S3Q96PC3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AC140113.2-201ENST00000604370 208 ntBASIC11.13□□□□□ -0.63
AP1S3Q96PC3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms