Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 AC131902.2-201ENST00000566892 2172 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S1Q92572 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S1Q92572 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
AP3S1Q92572 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
AP3S1Q92572 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 TLE1P1-201ENST00000422965 589 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S1Q92572 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.91□□□□□ -0.34
AP3S1Q92572 AL049840.3-201ENST00000602669 611 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S1Q92572 AC018529.1-201ENST00000613063 361 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 AC091812.2-201ENST00000619081 385 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.91□□□□□ -0.34
AP3S1Q92572 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S1Q92572 AF228730.6-201ENST00000641497 218 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 AC084121.3-201ENST00000641716 218 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S1Q92572 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S1Q92572 MARK2P9-201ENST00000430958 1727 ntBASIC12.91□□□□□ -0.34
AP3S1Q92572 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S1Q92572 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 MRPL37P1-201ENST00000592451 1337 ntBASIC12.9□□□□□ -0.34
AP3S1Q92572 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S1Q92572 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S1Q92572 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 SALL4P5-201ENST00000419001 1760 ntBASIC12.9□□□□□ -0.34
AP3S1Q92572 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 YBX2P1-201ENST00000394192 760 ntBASIC12.9□□□□□ -0.34
AP3S1Q92572 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.9□□□□□ -0.34
AP3S1Q92572 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.9□□□□□ -0.34
AP3S1Q92572 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.9□□□□□ -0.34
AP3S1Q92572 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
AP3S1Q92572 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S1Q92572 AC025048.3-201ENST00000590609 569 ntBASIC12.9□□□□□ -0.34
AP3S1Q92572 AC005702.4-201ENST00000618393 416 ntBASIC12.9□□□□□ -0.34
AP3S1Q92572 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.9□□□□□ -0.34
AP3S1Q92572 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 AL158070.2-201ENST00000623713 1621 ntBASIC12.9□□□□□ -0.34
AP3S1Q92572 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 742.3 ms