Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 AL136295.7-201ENST00000619226 1200 ntBASIC13.87□□□□□ -0.19
TM9SF4Q92544 AC091812.3-201ENST00000621362 345 ntBASIC13.87□□□□□ -0.19
TM9SF4Q92544 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 BEND3P1-201ENST00000421591 1944 ntBASIC13.87□□□□□ -0.19
TM9SF4Q92544 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 AC044849.1-201ENST00000519737 1188 ntBASIC13.86□□□□□ -0.19
TM9SF4Q92544 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 AC079328.1-201ENST00000560358 952 ntBASIC13.86□□□□□ -0.19
TM9SF4Q92544 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF4Q92544 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TM9SF4Q92544 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 AC016700.1-201ENST00000429424 312 ntBASIC13.85□□□□□ -0.19
TM9SF4Q92544 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 CHMP1AP1-201ENST00000445563 662 ntBASIC13.85□□□□□ -0.19
TM9SF4Q92544 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 MESTP3-201ENST00000503460 968 ntBASIC13.85□□□□□ -0.19
TM9SF4Q92544 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 RN7SL163P-201ENST00000583100 276 ntBASIC13.85□□□□□ -0.19
TM9SF4Q92544 AP001505.2-201ENST00000616815 443 ntBASIC13.85□□□□□ -0.19
TM9SF4Q92544 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms