Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 CICP20-201ENST00000443330 2801 ntBASIC12.83□□□□□ -0.36
CPEB3Q8NE35 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CPEB3Q8NE35 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CPEB3Q8NE35 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AC117489.1-201ENST00000625169 3217 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 MIR326-201ENST00000362220 95 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms