Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NRADDP-201ENST00000437305 691 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AL356000.1-201ENST00000441073 1238 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 SLC25A15P1-201ENST00000456738 342 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 SLC25A15P3-201ENST00000505530 290 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 CES1P2-201ENST00000566467 1242 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AC067931.2-201ENST00000623655 2003 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 ALG1L15P-201ENST00000482834 794 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AP003040.1-201ENST00000532044 1024 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AP006248.1-201ENST00000610471 67 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AL121949.3-201ENST00000406684 385 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 MED15P3-201ENST00000413613 326 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 PEBP1P3-201ENST00000455475 548 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 SNORD3B-1-201ENST00000577988 758 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AC020922.4-201ENST00000621389 339 ntBASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CCDC168Q8NDH2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms