Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 FO681548.1-201ENST00000455617 1132 ntBASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 TUBB8P4-201ENST00000511806 1324 ntBASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CLDN22Q8N7P3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 MESTP3-201ENST00000503460 968 ntBASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 RPSAP52-203ENST00000622976 1023 ntBASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 AL033527.5-201ENST00000641382 801 ntBASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms