Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AC090505.1-201ENST00000430515 1834 ntBASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AC018735.1-201ENST00000437208 1502 ntBASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AC108725.1-201ENST00000495472 409 ntBASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SCUBE3Q8IX30 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC097376.2-205ENST00000610159 5334 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 KRT8P29-201ENST00000420409 1371 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC136759.1-202ENST00000530858 2194 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 FAM58BP-201ENST00000439056 645 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC012441.2-201ENST00000444843 739 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC104306.2-201ENST00000451877 341 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC005962.1-201ENST00000584100 773 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC009884.2-201ENST00000603110 324 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC007663.3-201ENST00000609632 465 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC107308.1-201ENST00000615897 301 ntBASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCUBE3Q8IX30 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms