Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 FAM58BP-201ENST00000439056 645 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 VDAC1P1-201ENST00000439229 848 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 AC130709.1-201ENST00000484779 1212 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 AC008723.1-201ENST00000506922 207 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 DUX4L46-201ENST00000566845 751 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 AP000845.1-201ENST00000581677 2131 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 RPL17P45-201ENST00000586289 509 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 FO393412.1-201ENST00000619841 382 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 CICP24-201ENST00000605464 2705 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC126365.1-201ENST00000578585 1514 ntBASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 E2F3P2-201ENST00000447755 1422 ntBASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AP000593.2-201ENST00000542775 1433 ntBASIC15.53■□□□□ 0.08
RNF135Q8IUD6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 C2orf69P1-201ENST00000563532 1093 ntBASIC15.53■□□□□ 0.08
RNF135Q8IUD6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 SHC1P1-201ENST00000425230 1745 ntBASIC15.53■□□□□ 0.08
RNF135Q8IUD6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 REXO1L2P-201ENST00000425429 2069 ntBASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF135Q8IUD6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.52■□□□□ 0.08
RNF135Q8IUD6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms