Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 AC027237.1-201ENST00000560942 655 ntBASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 NUDT4P2-201ENST00000578341 546 ntBASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 AL022334.2-201ENST00000610000 484 ntBASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 MIR6756-201ENST00000616240 63 ntBASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 AL161773.1-201ENST00000624845 863 ntBASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 PPT1-215ENST00000641471 2368 ntBASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AC073911.3-201ENST00000624401 631 ntBASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AL132780.4-201ENST00000624870 1135 ntBASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCDC149Q6ZUS6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC149Q6ZUS6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms