Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RNA5SP423-201ENST00000517127 109 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 RN7SL574P-201ENST00000581512 297 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 NAP1L6-202ENST00000641404 1222 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 KRT8P19-201ENST00000551916 1455 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H3F3CQ6NXT2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 XBP1P1-201ENST00000436573 652 ntBASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 RN7SL720P-201ENST00000488178 304 ntBASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 IMP3P2-201ENST00000489760 475 ntBASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 KHSRPP1-201ENST00000427983 1768 ntBASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H3F3CQ6NXT2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AL353637.1-201ENST00000451571 732 ntBASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AC015967.2-201ENST00000624092 234 ntBASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AC006435.4-201ENST00000625037 234 ntBASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 AL356737.1-201ENST00000634391 234 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms