Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 GUCY2EP-203ENST00000531117 1918 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC009093.10-201ENST00000641956 1442 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.19
RIF1Q5UIP0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RIF1Q5UIP0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AC006987.1-201ENST00000413610 527 ntBASIC13.89□□□□□ -0.19
RIF1Q5UIP0 TPT1P9-201ENST00000413759 514 ntBASIC13.89□□□□□ -0.19
RIF1Q5UIP0 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.89□□□□□ -0.19
RIF1Q5UIP0 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AL009176.1-201ENST00000607876 650 ntBASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AL021707.6-201ENST00000609212 491 ntBASIC13.89□□□□□ -0.19
RIF1Q5UIP0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AC139712.1-201ENST00000378256 1875 ntBASIC13.89□□□□□ -0.19
RIF1Q5UIP0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AGGF1P2-201ENST00000426656 2106 ntBASIC13.89□□□□□ -0.19
RIF1Q5UIP0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.89□□□□□ -0.19
RIF1Q5UIP0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 AL596087.1-201ENST00000400979 1969 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 TPT1P11-201ENST00000458482 498 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 RNF7-205ENST00000480908 782 ntTSL 4 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 RN7SL556P-201ENST00000582856 298 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PRR20FP-201ENST00000603320 180 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 AC139100.2-201ENST00000616901 662 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 AC080080.1-201ENST00000625121 2420 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms