Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 MBLAC2-202ENST00000514906 1936 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 TCAM1P-207ENST00000485295 1537 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 RPS2P32-201ENST00000439199 892 ntBASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ST13P19-201ENST00000442505 1124 ntBASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AL591846.1-201ENST00000451736 433 ntBASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AC009884.2-201ENST00000603110 324 ntBASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AC018735.1-201ENST00000437208 1502 ntBASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PTPN20Q4JDL3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 RNMTL1P1-201ENST00000454103 560 ntBASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms