Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 LINC01165-201ENST00000445190 1623 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC215219.1-201ENST00000400706 1817 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.72■□□□□ 0.27
USH1GQ495M9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC015909.3-201ENST00000572855 1794 ntBASIC16.72■□□□□ 0.27
USH1GQ495M9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC091046.1-201ENST00000331871 207 ntBASIC16.72■□□□□ 0.27
USH1GQ495M9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.72■□□□□ 0.27
USH1GQ495M9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.72■□□□□ 0.27
USH1GQ495M9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC124068.2-201ENST00000569473 1109 ntBASIC16.72■□□□□ 0.27
USH1GQ495M9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC012044.1-201ENST00000603431 297 ntBASIC16.72■□□□□ 0.27
USH1GQ495M9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
USH1GQ495M9 AC079336.7-201ENST00000623428 1078 ntBASIC16.72■□□□□ 0.27
USH1GQ495M9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 KRT8P19-201ENST00000551916 1455 ntBASIC16.72■□□□□ 0.27
USH1GQ495M9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.72■□□□□ 0.27
USH1GQ495M9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USH1GQ495M9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.72■□□□□ 0.27
USH1GQ495M9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 AHCYP4-201ENST00000419201 1315 ntBASIC16.71■□□□□ 0.27
USH1GQ495M9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
USH1GQ495M9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
USH1GQ495M9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.71■□□□□ 0.27
USH1GQ495M9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
USH1GQ495M9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.71■□□□□ 0.27
USH1GQ495M9 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.71■□□□□ 0.27
USH1GQ495M9 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.71■□□□□ 0.27
USH1GQ495M9 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.71■□□□□ 0.27
USH1GQ495M9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
USH1GQ495M9 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
USH1GQ495M9 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.71■□□□□ 0.27
USH1GQ495M9 MEG3_2.1-201ENST00000611456 105 ntBASIC16.71■□□□□ 0.27
USH1GQ495M9 AL353770.1-201ENST00000614915 403 ntBASIC16.71■□□□□ 0.27
USH1GQ495M9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms