Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.82■□□□□ 0.6
COL16A1Q07092 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
COL16A1Q07092 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.82■□□□□ 0.6
COL16A1Q07092 TMBIM7P-203ENST00000641617 1718 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC079328.2-201ENST00000561241 3354 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL16A1Q07092 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC18.82■□□□□ 0.6
COL16A1Q07092 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC005722.1-201ENST00000431878 964 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 JPT1-205ENST00000470924 663 ntTSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 HNRNPA1P72-201ENST00000529511 967 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC127002.1-201ENST00000619123 455 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
COL16A1Q07092 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 KRT8P38-201ENST00000441370 1430 ntBASIC18.81■□□□□ 0.6
COL16A1Q07092 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC18.81■□□□□ 0.6
COL16A1Q07092 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL16A1Q07092 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COL16A1Q07092 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
COL16A1Q07092 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
COL16A1Q07092 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.81■□□□□ 0.6
COL16A1Q07092 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC18.81■□□□□ 0.6
COL16A1Q07092 RBM14-205ENST00000443702 732 ntTSL 3 BASIC18.81■□□□□ 0.6
COL16A1Q07092 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.81■□□□□ 0.6
COL16A1Q07092 AC009517.1-201ENST00000454750 570 ntBASIC18.81■□□□□ 0.6
COL16A1Q07092 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC18.81■□□□□ 0.6
COL16A1Q07092 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC18.81■□□□□ 0.6
COL16A1Q07092 AL137028.2-201ENST00000614601 256 ntBASIC18.81■□□□□ 0.6
COL16A1Q07092 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
COL16A1Q07092 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL16A1Q07092 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL16A1Q07092 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL16A1Q07092 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL16A1Q07092 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC18.8■□□□□ 0.6
COL16A1Q07092 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
COL16A1Q07092 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC18.8■□□□□ 0.6
COL16A1Q07092 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC18.8■□□□□ 0.6
COL16A1Q07092 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC18.8■□□□□ 0.6
COL16A1Q07092 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 ALG10-202ENST00000538927 571 ntTSL 5 BASIC18.8■□□□□ 0.6
COL16A1Q07092 AL512310.5-201ENST00000551999 515 ntBASIC18.8■□□□□ 0.6
COL16A1Q07092 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC18.8■□□□□ 0.6
COL16A1Q07092 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC18.8■□□□□ 0.6
COL16A1Q07092 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC18.8■□□□□ 0.6
COL16A1Q07092 AC063977.2-201ENST00000601996 421 ntBASIC18.8■□□□□ 0.6
COL16A1Q07092 AC009812.1-201ENST00000605948 1059 ntBASIC18.8■□□□□ 0.6
COL16A1Q07092 GARS-210ENST00000627489 324 ntTSL 4 BASIC18.8■□□□□ 0.6
COL16A1Q07092 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 AL365203.3-201ENST00000609742 2057 ntBASIC18.8■□□□□ 0.6
COL16A1Q07092 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL16A1Q07092 PRAL-201ENST00000624952 3286 ntBASIC18.8■□□□□ 0.6
COL16A1Q07092 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.79■□□□□ 0.6
COL16A1Q07092 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL16A1Q07092 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL16A1Q07092 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms