Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 ACTBP8-201ENST00000403258 1108 ntBASIC10.48□□□□□ -0.73
UBE2D3P61077 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
UBE2D3P61077 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.48□□□□□ -0.73
UBE2D3P61077 AC087499.6-201ENST00000411576 835 ntBASIC10.48□□□□□ -0.73
UBE2D3P61077 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.48□□□□□ -0.73
UBE2D3P61077 SPTLC1P1-201ENST00000447199 261 ntBASIC10.48□□□□□ -0.73
UBE2D3P61077 KRT18P25-201ENST00000508931 1278 ntBASIC10.48□□□□□ -0.73
UBE2D3P61077 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC10.48□□□□□ -0.73
UBE2D3P61077 ENPP7P5-201ENST00000541031 1031 ntBASIC10.48□□□□□ -0.73
UBE2D3P61077 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 AC003102.2-201ENST00000589195 1469 ntBASIC10.48□□□□□ -0.73
UBE2D3P61077 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.48□□□□□ -0.73
UBE2D3P61077 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC073548.1-201ENST00000624088 1882 ntBASIC10.47□□□□□ -0.73
UBE2D3P61077 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.47□□□□□ -0.73
UBE2D3P61077 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UBE2D3P61077 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ACKR1-201ENST00000368121 1240 ntBASIC10.47□□□□□ -0.73
UBE2D3P61077 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D3P61077 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC10.47□□□□□ -0.73
UBE2D3P61077 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D3P61077 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D3P61077 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.47□□□□□ -0.73
UBE2D3P61077 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.47□□□□□ -0.73
UBE2D3P61077 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms