Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 AC125807.1-201ENST00000483097 614 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 SPDYE18-201ENST00000510091 1050 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 AC109322.1-201ENST00000524499 1264 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.77□□□□□ -0.37
CLDN12P56749 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN12P56749 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN12P56749 MIR3687-2-201ENST00000577708 61 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 AL671883.3-201ENST00000603274 991 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 MIR3687-1-201ENST00000614492 61 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN12P56749 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN12P56749 Z92544.3-201ENST00000624747 417 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CLDN12P56749 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 MRPL37P1-201ENST00000592451 1337 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CLDN12P56749 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN12P56749 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.76□□□□□ -0.37
CLDN12P56749 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.76□□□□□ -0.37
CLDN12P56749 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.76□□□□□ -0.37
CLDN12P56749 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 AC069120.2-201ENST00000524091 540 ntBASIC12.76□□□□□ -0.37
CLDN12P56749 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.76□□□□□ -0.37
CLDN12P56749 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.76□□□□□ -0.37
CLDN12P56749 AC027612.4-201ENST00000605371 583 ntBASIC12.76□□□□□ -0.37
CLDN12P56749 BX539320.1-201ENST00000623759 877 ntBASIC12.76□□□□□ -0.37
CLDN12P56749 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
CLDN12P56749 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLDN12P56749 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN12P56749 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.76□□□□□ -0.37
CLDN12P56749 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN12P56749 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLDN12P56749 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN12P56749 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms