Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLDN8P56748 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN8P56748 FAM8A4P-201ENST00000435433 1213 ntBASIC13.9□□□□□ -0.18
CLDN8P56748 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 AL035414.1-201ENST00000451327 857 ntBASIC13.9□□□□□ -0.18
CLDN8P56748 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN8P56748 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN8P56748 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.9□□□□□ -0.18
CLDN8P56748 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 AP003171.2-201ENST00000528208 925 ntBASIC13.9□□□□□ -0.18
CLDN8P56748 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN8P56748 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN8P56748 OR10B1P-201ENST00000601666 907 ntBASIC13.9□□□□□ -0.18
CLDN8P56748 AC008825.2-201ENST00000603374 718 ntBASIC13.9□□□□□ -0.18
CLDN8P56748 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN8P56748 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN8P56748 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN8P56748 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.9□□□□□ -0.19
CLDN8P56748 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.9□□□□□ -0.19
CLDN8P56748 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN8P56748 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN8P56748 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 FAM90A12P-201ENST00000519497 2375 ntBASIC13.89□□□□□ -0.19
CLDN8P56748 FAM90A24P-201ENST00000520792 2369 ntBASIC13.89□□□□□ -0.19
CLDN8P56748 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 AC005229.1-201ENST00000392885 409 ntBASIC13.89□□□□□ -0.19
CLDN8P56748 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN8P56748 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN8P56748 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 AC027601.3-201ENST00000622907 509 ntBASIC13.89□□□□□ -0.19
CLDN8P56748 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN8P56748 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN8P56748 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 AC073548.1-201ENST00000624088 1882 ntBASIC13.89□□□□□ -0.19
CLDN8P56748 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN8P56748 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CLDN8P56748 CICP17-201ENST00000418553 2377 ntBASIC13.88□□□□□ -0.19
CLDN8P56748 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN8P56748 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN8P56748 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms