Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH6P55285 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH6P55285 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH6P55285 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH6P55285 AL136301.1-201ENST00000615830 422 ntBASIC15.23■□□□□ 0.03
CDH6P55285 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH6P55285 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH6P55285 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH6P55285 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH6P55285 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH6P55285 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH6P55285 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH6P55285 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH6P55285 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH6P55285 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH6P55285 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH6P55285 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH6P55285 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH6P55285 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH6P55285 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH6P55285 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH6P55285 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH6P55285 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.22■□□□□ 0.03
CDH6P55285 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.22■□□□□ 0.03
CDH6P55285 AL355994.2-201ENST00000447882 704 ntBASIC15.22■□□□□ 0.03
CDH6P55285 KLF2P4-201ENST00000451959 1225 ntBASIC15.22■□□□□ 0.03
CDH6P55285 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH6P55285 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 AC027237.1-201ENST00000560942 655 ntBASIC15.22■□□□□ 0.03
CDH6P55285 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.22■□□□□ 0.03
CDH6P55285 AC008825.2-201ENST00000603374 718 ntBASIC15.22■□□□□ 0.03
CDH6P55285 AL512343.1-201ENST00000605837 169 ntBASIC15.22■□□□□ 0.03
CDH6P55285 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH6P55285 AC027601.3-201ENST00000622907 509 ntBASIC15.22■□□□□ 0.03
CDH6P55285 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH6P55285 AC009093.10-201ENST00000641956 1442 ntBASIC15.22■□□□□ 0.03
CDH6P55285 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.22■□□□□ 0.03
CDH6P55285 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH6P55285 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH6P55285 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH6P55285 MST1P2-201ENST00000457982 2291 ntBASIC15.22■□□□□ 0.03
CDH6P55285 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH6P55285 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH6P55285 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH6P55285 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH6P55285 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDH6P55285 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH6P55285 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH6P55285 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 AC079776.1-201ENST00000401540 1152 ntBASIC15.21■□□□□ 0.03
CDH6P55285 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH6P55285 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH6P55285 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH6P55285 CNN2P10-201ENST00000443067 918 ntBASIC15.21■□□□□ 0.03
CDH6P55285 CHMP1AP1-201ENST00000445563 662 ntBASIC15.21■□□□□ 0.03
CDH6P55285 AL035414.1-201ENST00000451327 857 ntBASIC15.21■□□□□ 0.03
CDH6P55285 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH6P55285 CTBP2P5-201ENST00000454986 1264 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms