Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 E2F3P2-201ENST00000447755 1422 ntBASIC14.42□□□□□ -0.1
CDKN2DP55273 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 HIST2H2BB-201ENST00000449108 381 ntBASIC14.42□□□□□ -0.1
CDKN2DP55273 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.42□□□□□ -0.1
CDKN2DP55273 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 AP006547.1-201ENST00000563435 692 ntBASIC14.42□□□□□ -0.1
CDKN2DP55273 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.42□□□□□ -0.1
CDKN2DP55273 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 AC023794.5-201ENST00000564380 2157 ntBASIC14.41□□□□□ -0.1
CDKN2DP55273 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 AC130686.1-201ENST00000622936 2466 ntBASIC14.41□□□□□ -0.1
CDKN2DP55273 TMBIM7P-202ENST00000641474 1516 ntBASIC14.41□□□□□ -0.1
CDKN2DP55273 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.41□□□□□ -0.1
CDKN2DP55273 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.41□□□□□ -0.1
CDKN2DP55273 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.41□□□□□ -0.1
CDKN2DP55273 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 COX20P2-201ENST00000452636 358 ntBASIC14.41□□□□□ -0.1
CDKN2DP55273 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.41□□□□□ -0.1
CDKN2DP55273 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.41□□□□□ -0.1
CDKN2DP55273 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.41□□□□□ -0.1
CDKN2DP55273 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.41□□□□□ -0.1
CDKN2DP55273 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDKN2DP55273 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 AC111170.3-201ENST00000624282 2464 ntBASIC14.41□□□□□ -0.1
CDKN2DP55273 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.41□□□□□ -0.1
CDKN2DP55273 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.41□□□□□ -0.1
CDKN2DP55273 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDKN2DP55273 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms