Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CASP6P55212 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CASP6P55212 INE2-201ENST00000630399 1874 ntBASIC13.23□□□□□ -0.29
CASP6P55212 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CASP6P55212 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CASP6P55212 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CASP6P55212 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CASP6P55212 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.23□□□□□ -0.29
CASP6P55212 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CASP6P55212 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 OR2I1P-210ENST00000642037 4691 ntBASIC13.22□□□□□ -0.29
CASP6P55212 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CASP6P55212 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.22□□□□□ -0.29
CASP6P55212 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 VDAC1P1-201ENST00000439229 848 ntBASIC13.22□□□□□ -0.29
CASP6P55212 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.22□□□□□ -0.29
CASP6P55212 SCARNA21-201ENST00000517026 139 ntBASIC13.22□□□□□ -0.29
CASP6P55212 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.22□□□□□ -0.29
CASP6P55212 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 AC051619.9-201ENST00000623237 597 ntBASIC13.22□□□□□ -0.29
CASP6P55212 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.22□□□□□ -0.29
CASP6P55212 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 SALL4P5-201ENST00000419001 1760 ntBASIC13.22□□□□□ -0.29
CASP6P55212 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CASP6P55212 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.22□□□□□ -0.29
CASP6P55212 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
CASP6P55212 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CASP6P55212 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 FRMPD2B-201ENST00000431305 1347 ntBASIC13.21□□□□□ -0.29
CASP6P55212 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.21□□□□□ -0.29
CASP6P55212 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.21□□□□□ -0.29
CASP6P55212 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CASP6P55212 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.21□□□□□ -0.29
CASP6P55212 RPL7P35-201ENST00000446943 740 ntBASIC13.21□□□□□ -0.29
CASP6P55212 AC073150.1-201ENST00000450406 1084 ntBASIC13.21□□□□□ -0.29
CASP6P55212 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.21□□□□□ -0.29
CASP6P55212 AC104784.1-201ENST00000473096 294 ntBASIC13.21□□□□□ -0.29
CASP6P55212 ALG3P1-201ENST00000508806 1114 ntBASIC13.21□□□□□ -0.29
CASP6P55212 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
CASP6P55212 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.21□□□□□ -0.29
CASP6P55212 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.21□□□□□ -0.29
CASP6P55212 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CASP6P55212 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.21□□□□□ -0.29
CASP6P55212 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.21□□□□□ -0.29
CASP6P55212 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.21□□□□□ -0.29
CASP6P55212 AF254983.2-201ENST00000612331 135 ntBASIC13.21□□□□□ -0.29
CASP6P55212 LINC01783-202ENST00000614408 828 ntBASIC13.21□□□□□ -0.29
CASP6P55212 BX284668.2-205ENST00000619677 828 ntBASIC13.21□□□□□ -0.29
CASP6P55212 AC011491.1-203ENST00000637688 543 ntBASIC13.21□□□□□ -0.29
CASP6P55212 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.21□□□□□ -0.29
CASP6P55212 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms