Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.21□□□□□ -0.13
PDX1P52945 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.21□□□□□ -0.13
PDX1P52945 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PDX1P52945 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.21□□□□□ -0.14
PDX1P52945 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDX1P52945 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
PDX1P52945 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.21□□□□□ -0.14
PDX1P52945 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PDX1P52945 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
PDX1P52945 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
PDX1P52945 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.21□□□□□ -0.14
PDX1P52945 LILRP1-201ENST00000444199 1370 ntBASIC14.21□□□□□ -0.14
PDX1P52945 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.21□□□□□ -0.14
PDX1P52945 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDX1P52945 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDX1P52945 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PDX1P52945 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PDX1P52945 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 AC023090.2-201ENST00000625182 2110 ntBASIC14.2□□□□□ -0.14
PDX1P52945 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
PDX1P52945 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.2□□□□□ -0.14
PDX1P52945 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.2□□□□□ -0.14
PDX1P52945 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 ALG3P1-201ENST00000508806 1114 ntBASIC14.2□□□□□ -0.14
PDX1P52945 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
PDX1P52945 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.2□□□□□ -0.14
PDX1P52945 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
PDX1P52945 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.2□□□□□ -0.14
PDX1P52945 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 MEG3_2.1-201ENST00000611456 105 ntBASIC14.2□□□□□ -0.14
PDX1P52945 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.2□□□□□ -0.14
PDX1P52945 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.2□□□□□ -0.14
PDX1P52945 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDX1P52945 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.2□□□□□ -0.14
PDX1P52945 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDX1P52945 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.2□□□□□ -0.14
PDX1P52945 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.2□□□□□ -0.14
PDX1P52945 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 FAM45BP-202ENST00000592932 1624 ntBASIC14.19□□□□□ -0.14
PDX1P52945 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PDX1P52945 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.19□□□□□ -0.14
PDX1P52945 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms