Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC073869.2-201ENST00000417338 1026 ntBASIC16.04■□□□□ 0.16
CDK7P50613 GCSHP3-201ENST00000431120 391 ntBASIC16.04■□□□□ 0.16
CDK7P50613 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.04■□□□□ 0.16
CDK7P50613 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.04■□□□□ 0.16
CDK7P50613 RPL18AP8-201ENST00000486071 528 ntBASIC16.04■□□□□ 0.16
CDK7P50613 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.04■□□□□ 0.16
CDK7P50613 DNM1P51-201ENST00000558149 522 ntBASIC16.04■□□□□ 0.16
CDK7P50613 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.04■□□□□ 0.16
CDK7P50613 MIR2392-201ENST00000584881 84 ntBASIC16.04■□□□□ 0.16
CDK7P50613 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.04■□□□□ 0.16
CDK7P50613 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.04■□□□□ 0.16
CDK7P50613 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK7P50613 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK7P50613 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 AP002414.2-201ENST00000591780 3365 ntBASIC16.03■□□□□ 0.16
CDK7P50613 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.03■□□□□ 0.16
CDK7P50613 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 AL109954.1-202ENST00000564051 2148 ntBASIC16.03■□□□□ 0.16
CDK7P50613 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK7P50613 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 AQP7P5-201ENST00000428759 1049 ntBASIC16.03■□□□□ 0.16
CDK7P50613 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 AQP7P4-201ENST00000447083 1042 ntBASIC16.03■□□□□ 0.16
CDK7P50613 AQP7P2-201ENST00000453967 1041 ntBASIC16.03■□□□□ 0.16
CDK7P50613 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK7P50613 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.03■□□□□ 0.16
CDK7P50613 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.03■□□□□ 0.16
CDK7P50613 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK7P50613 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.03■□□□□ 0.16
CDK7P50613 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CDK7P50613 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK7P50613 AC073592.2-201ENST00000623062 780 ntBASIC16.03■□□□□ 0.16
CDK7P50613 AQP7P3-201ENST00000624547 1041 ntBASIC16.03■□□□□ 0.16
CDK7P50613 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CDK7P50613 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK7P50613 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDK7P50613 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK7P50613 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK7P50613 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK7P50613 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDK7P50613 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDK7P50613 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDK7P50613 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 C18orf15-201ENST00000623680 2534 ntBASIC16.02■□□□□ 0.16
CDK7P50613 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDK7P50613 AC139712.1-201ENST00000378256 1875 ntBASIC16.02■□□□□ 0.16
CDK7P50613 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK7P50613 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK7P50613 RPL35P9-201ENST00000446059 350 ntBASIC16.02■□□□□ 0.16
CDK7P50613 AC018638.5-201ENST00000450885 754 ntBASIC16.02■□□□□ 0.16
CDK7P50613 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK7P50613 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK7P50613 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.02■□□□□ 0.16
CDK7P50613 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDK7P50613 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK7P50613 MIR4472-1-201ENST00000584349 80 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms