Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.86□□□□□ -0.19
CLK1P49759 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 C1QBPP1-201ENST00000400117 770 ntBASIC13.86□□□□□ -0.19
CLK1P49759 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.86□□□□□ -0.19
CLK1P49759 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.86□□□□□ -0.19
CLK1P49759 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.86□□□□□ -0.19
CLK1P49759 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 AC190387.1-201ENST00000551683 408 ntBASIC13.86□□□□□ -0.19
CLK1P49759 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.86□□□□□ -0.19
CLK1P49759 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLK1P49759 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 AC007431.3-201ENST00000623221 587 ntBASIC13.86□□□□□ -0.19
CLK1P49759 AC023090.2-201ENST00000625182 2110 ntBASIC13.86□□□□□ -0.19
CLK1P49759 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.86□□□□□ -0.19
CLK1P49759 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 AC130686.1-201ENST00000622936 2466 ntBASIC13.86□□□□□ -0.19
CLK1P49759 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 AC093525.8-201ENST00000624099 1342 ntBASIC13.86□□□□□ -0.19
CLK1P49759 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLK1P49759 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLK1P49759 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CLK1P49759 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLK1P49759 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.85□□□□□ -0.19
CLK1P49759 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.85□□□□□ -0.19
CLK1P49759 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.85□□□□□ -0.19
CLK1P49759 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 MEX3B-202ENST00000558133 4333 ntBASIC13.85□□□□□ -0.19
CLK1P49759 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.85□□□□□ -0.19
CLK1P49759 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLK1P49759 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 AC007787.1-201ENST00000588095 1583 ntBASIC13.85□□□□□ -0.19
CLK1P49759 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 KRT8P22-201ENST00000562317 1415 ntBASIC13.85□□□□□ -0.19
CLK1P49759 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 Z82170.1-201ENST00000625081 3192 ntBASIC13.85□□□□□ -0.19
CLK1P49759 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 CRB3P1-201ENST00000449338 276 ntBASIC13.85□□□□□ -0.19
CLK1P49759 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.85□□□□□ -0.19
CLK1P49759 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms