Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
MDH1P40925 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
MDH1P40925 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
MDH1P40925 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.69□□□□□ -0.06
MDH1P40925 AL450487.1-201ENST00000426799 995 ntBASIC14.69□□□□□ -0.06
MDH1P40925 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.69□□□□□ -0.06
MDH1P40925 FAM58CP-201ENST00000435741 640 ntBASIC14.69□□□□□ -0.06
MDH1P40925 AL592309.1-201ENST00000443127 649 ntBASIC14.69□□□□□ -0.06
MDH1P40925 FAAHP1-202ENST00000446499 1238 ntBASIC14.69□□□□□ -0.06
MDH1P40925 TIMM8BP1-201ENST00000452384 211 ntBASIC14.69□□□□□ -0.06
MDH1P40925 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 AC103988.2-201ENST00000561804 725 ntBASIC14.69□□□□□ -0.06
MDH1P40925 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.69□□□□□ -0.06
MDH1P40925 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.69□□□□□ -0.06
MDH1P40925 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 AC007967.4-201ENST00000614700 386 ntBASIC14.69□□□□□ -0.06
MDH1P40925 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
MDH1P40925 AL731571.1-201ENST00000617058 5428 ntBASIC14.69□□□□□ -0.06
MDH1P40925 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
MDH1P40925 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.69□□□□□ -0.06
MDH1P40925 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MDH1P40925 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.69□□□□□ -0.06
MDH1P40925 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.68□□□□□ -0.06
MDH1P40925 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 TUBB3P1-201ENST00000405796 1332 ntBASIC14.68□□□□□ -0.06
MDH1P40925 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.68□□□□□ -0.06
MDH1P40925 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.68□□□□□ -0.06
MDH1P40925 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 ABCD1P2-201ENST00000429313 1601 ntBASIC14.68□□□□□ -0.06
MDH1P40925 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.68□□□□□ -0.06
MDH1P40925 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.68□□□□□ -0.06
MDH1P40925 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.68□□□□□ -0.06
MDH1P40925 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.68□□□□□ -0.06
MDH1P40925 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
MDH1P40925 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.68□□□□□ -0.06
MDH1P40925 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.68□□□□□ -0.06
MDH1P40925 PI4KAP2-201ENST00000360806 2080 ntBASIC14.68□□□□□ -0.06
MDH1P40925 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
MDH1P40925 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.68□□□□□ -0.06
MDH1P40925 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MDH1P40925 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
MDH1P40925 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.68□□□□□ -0.06
MDH1P40925 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.68□□□□□ -0.06
MDH1P40925 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
MDH1P40925 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.67□□□□□ -0.06
MDH1P40925 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MDH1P40925 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms