Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.21■□□□□ 0.51
COL15A1P39059 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 PGAM1P12-201ENST00000505622 748 ntBASIC18.21■□□□□ 0.51
COL15A1P39059 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.21■□□□□ 0.51
COL15A1P39059 AC011247.3-201ENST00000603297 438 ntBASIC18.21■□□□□ 0.51
COL15A1P39059 AC104506.1-201ENST00000609247 429 ntBASIC18.21■□□□□ 0.51
COL15A1P39059 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.21■□□□□ 0.51
COL15A1P39059 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 AC025183.3-201ENST00000623526 1482 ntBASIC18.21■□□□□ 0.51
COL15A1P39059 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
COL15A1P39059 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL15A1P39059 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL15A1P39059 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL15A1P39059 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.2■□□□□ 0.5
COL15A1P39059 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.2■□□□□ 0.5
COL15A1P39059 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.2■□□□□ 0.5
COL15A1P39059 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.2■□□□□ 0.5
COL15A1P39059 RPL35P9-201ENST00000446059 350 ntBASIC18.2■□□□□ 0.5
COL15A1P39059 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.2■□□□□ 0.5
COL15A1P39059 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.2■□□□□ 0.5
COL15A1P39059 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.2■□□□□ 0.5
COL15A1P39059 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.2■□□□□ 0.5
COL15A1P39059 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.2■□□□□ 0.5
COL15A1P39059 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.2■□□□□ 0.5
COL15A1P39059 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COL15A1P39059 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.2■□□□□ 0.5
COL15A1P39059 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.2■□□□□ 0.5
COL15A1P39059 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
COL15A1P39059 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.2■□□□□ 0.5
COL15A1P39059 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
COL15A1P39059 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL15A1P39059 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
COL15A1P39059 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
COL15A1P39059 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 AL161932.2-201ENST00000435436 679 ntBASIC18.19■□□□□ 0.5
COL15A1P39059 SCARNA12-201ENST00000459155 270 ntBASIC18.19■□□□□ 0.5
COL15A1P39059 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COL15A1P39059 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
COL15A1P39059 RN7SL564P-201ENST00000496309 250 ntBASIC18.19■□□□□ 0.5
COL15A1P39059 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.19■□□□□ 0.5
COL15A1P39059 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.19■□□□□ 0.5
COL15A1P39059 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.19■□□□□ 0.5
COL15A1P39059 AC067931.2-201ENST00000623655 2003 ntBASIC18.19■□□□□ 0.5
COL15A1P39059 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
COL15A1P39059 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms