Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.06□□□□□ -0.16
PTX3P26022 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PTX3P26022 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.06□□□□□ -0.16
PTX3P26022 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.06□□□□□ -0.16
PTX3P26022 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.06□□□□□ -0.16
PTX3P26022 AC234783.1-201ENST00000441761 496 ntBASIC14.06□□□□□ -0.16
PTX3P26022 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.06□□□□□ -0.16
PTX3P26022 CROCCP4-201ENST00000457096 498 ntBASIC14.06□□□□□ -0.16
PTX3P26022 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.06□□□□□ -0.16
PTX3P26022 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.06□□□□□ -0.16
PTX3P26022 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.06□□□□□ -0.16
PTX3P26022 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.06□□□□□ -0.16
PTX3P26022 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.06□□□□□ -0.16
PTX3P26022 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 AL358472.3-201ENST00000608147 415 ntBASIC14.06□□□□□ -0.16
PTX3P26022 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.06□□□□□ -0.16
PTX3P26022 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.06□□□□□ -0.16
PTX3P26022 AC011474.4-201ENST00000623523 2076 ntBASIC14.06□□□□□ -0.16
PTX3P26022 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PTX3P26022 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.06□□□□□ -0.16
PTX3P26022 CR383656.2-201ENST00000548656 2254 ntBASIC14.06□□□□□ -0.16
PTX3P26022 AC005252.3-201ENST00000623855 2258 ntBASIC14.06□□□□□ -0.16
PTX3P26022 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTX3P26022 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PTX3P26022 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.05□□□□□ -0.16
PTX3P26022 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.05□□□□□ -0.16
PTX3P26022 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 CHMP1AP1-201ENST00000445563 662 ntBASIC14.05□□□□□ -0.16
PTX3P26022 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.05□□□□□ -0.16
PTX3P26022 HOMER2P2-201ENST00000451621 847 ntBASIC14.05□□□□□ -0.16
PTX3P26022 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PTX3P26022 RAB43P1-201ENST00000561790 589 ntBASIC14.05□□□□□ -0.16
PTX3P26022 PPY2P-201ENST00000582808 702 ntBASIC14.05□□□□□ -0.16
PTX3P26022 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.05□□□□□ -0.16
PTX3P26022 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.05□□□□□ -0.16
PTX3P26022 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
PTX3P26022 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.05□□□□□ -0.16
PTX3P26022 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTX3P26022 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PTX3P26022 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.04□□□□□ -0.16
PTX3P26022 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.04□□□□□ -0.16
PTX3P26022 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PTX3P26022 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.04□□□□□ -0.16
PTX3P26022 AC011498.7-201ENST00000624986 2027 ntBASIC14.04□□□□□ -0.16
PTX3P26022 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTX3P26022 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PTX3P26022 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms