Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 AC007274.2-201ENST00000421675 662 ntBASIC12.57□□□□□ -0.4
CD40P25942 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.57□□□□□ -0.4
CD40P25942 MYADML-201ENST00000474610 2147 ntBASIC12.57□□□□□ -0.4
CD40P25942 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.57□□□□□ -0.4
CD40P25942 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.57□□□□□ -0.4
CD40P25942 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 PGAM1P5-201ENST00000548011 764 ntBASIC12.57□□□□□ -0.4
CD40P25942 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.57□□□□□ -0.4
CD40P25942 AC124068.2-201ENST00000569473 1109 ntBASIC12.57□□□□□ -0.4
CD40P25942 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 AC020922.3-201ENST00000595064 547 ntBASIC12.57□□□□□ -0.4
CD40P25942 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.57□□□□□ -0.4
CD40P25942 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 AL353770.1-201ENST00000614915 403 ntBASIC12.57□□□□□ -0.4
CD40P25942 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CD40P25942 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD40P25942 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.57□□□□□ -0.4
CD40P25942 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CD40P25942 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
CD40P25942 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 PDIA3P2-201ENST00000428073 158 ntBASIC12.56□□□□□ -0.4
CD40P25942 TSPY25P-201ENST00000429463 745 ntBASIC12.56□□□□□ -0.4
CD40P25942 OR2R1P-201ENST00000441404 914 ntBASIC12.56□□□□□ -0.4
CD40P25942 ST13P19-201ENST00000442505 1124 ntBASIC12.56□□□□□ -0.4
CD40P25942 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.56□□□□□ -0.4
CD40P25942 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.56□□□□□ -0.4
CD40P25942 RNA5SP423-201ENST00000517127 109 ntBASIC12.56□□□□□ -0.4
CD40P25942 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms