Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 FGD5P1-202ENST00000614866 2498 ntBASIC12.35□□□□□ -0.43
COL8A2P25067 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
COL8A2P25067 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
COL8A2P25067 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.35□□□□□ -0.43
COL8A2P25067 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 AC245884.6-201ENST00000515672 1067 ntBASIC12.35□□□□□ -0.43
COL8A2P25067 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.35□□□□□ -0.43
COL8A2P25067 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 CHMP4BP1-201ENST00000556017 588 ntBASIC12.35□□□□□ -0.43
COL8A2P25067 AC103988.2-201ENST00000561804 725 ntBASIC12.35□□□□□ -0.43
COL8A2P25067 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.35□□□□□ -0.43
COL8A2P25067 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.35□□□□□ -0.43
COL8A2P25067 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
COL8A2P25067 AC084346.2-201ENST00000607097 949 ntBASIC12.35□□□□□ -0.43
COL8A2P25067 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.35□□□□□ -0.43
COL8A2P25067 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 AC015688.4-201ENST00000580780 1647 ntBASIC12.35□□□□□ -0.43
COL8A2P25067 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
COL8A2P25067 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL8A2P25067 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
COL8A2P25067 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COL8A2P25067 CYP4F23P-201ENST00000593402 1579 ntBASIC12.35□□□□□ -0.43
COL8A2P25067 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
COL8A2P25067 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.34□□□□□ -0.43
COL8A2P25067 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 UPF3AP2-201ENST00000457924 1132 ntBASIC12.34□□□□□ -0.43
COL8A2P25067 AC006122.1-201ENST00000493323 440 ntBASIC12.34□□□□□ -0.43
COL8A2P25067 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 RCC2P8-201ENST00000502779 1035 ntBASIC12.34□□□□□ -0.43
COL8A2P25067 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms