Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 GRK6P1-201ENST00000400595 1711 ntBASIC12.57□□□□□ -0.4
TNFSF4P23510 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 AC018529.2-202ENST00000611482 3087 ntBASIC12.57□□□□□ -0.4
TNFSF4P23510 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.57□□□□□ -0.4
TNFSF4P23510 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TNFSF4P23510 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.57□□□□□ -0.4
TNFSF4P23510 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TNFSF4P23510 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.57□□□□□ -0.4
TNFSF4P23510 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.57□□□□□ -0.4
TNFSF4P23510 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.57□□□□□ -0.4
TNFSF4P23510 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TNFSF4P23510 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 LINC01922-201ENST00000562582 719 ntBASIC12.57□□□□□ -0.4
TNFSF4P23510 AC100827.2-201ENST00000563214 1194 ntBASIC12.57□□□□□ -0.4
TNFSF4P23510 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.57□□□□□ -0.4
TNFSF4P23510 AC027601.3-201ENST00000622907 509 ntBASIC12.57□□□□□ -0.4
TNFSF4P23510 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.57□□□□□ -0.4
TNFSF4P23510 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.57□□□□□ -0.4
TNFSF4P23510 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.57□□□□□ -0.4
TNFSF4P23510 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 AC009093.2-202ENST00000620513 2079 ntBASIC12.57□□□□□ -0.4
TNFSF4P23510 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 AC073957.3-201ENST00000609998 6758 ntBASIC12.56□□□□□ -0.4
TNFSF4P23510 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.56□□□□□ -0.4
TNFSF4P23510 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 MIR326-201ENST00000362220 95 ntBASIC12.56□□□□□ -0.4
TNFSF4P23510 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.56□□□□□ -0.4
TNFSF4P23510 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.56□□□□□ -0.4
TNFSF4P23510 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 AC021723.1-201ENST00000486306 515 ntBASIC12.56□□□□□ -0.4
TNFSF4P23510 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.56□□□□□ -0.4
TNFSF4P23510 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.56□□□□□ -0.4
TNFSF4P23510 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TNFSF4P23510 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.56□□□□□ -0.4
TNFSF4P23510 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.56□□□□□ -0.4
TNFSF4P23510 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.56□□□□□ -0.4
TNFSF4P23510 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TNFSF4P23510 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TNFSF4P23510 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TNFSF4P23510 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.56□□□□□ -0.4
TNFSF4P23510 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms