Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.15■□□□□ 0.18
COL11A1P12107 AC012073.1-201ENST00000606114 1108 ntBASIC16.15■□□□□ 0.18
COL11A1P12107 AC008972.2-201ENST00000606587 494 ntBASIC16.15■□□□□ 0.18
COL11A1P12107 AL031673.1-201ENST00000611460 466 ntBASIC16.15■□□□□ 0.18
COL11A1P12107 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.15■□□□□ 0.18
COL11A1P12107 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.15■□□□□ 0.18
COL11A1P12107 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL11A1P12107 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL11A1P12107 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.14■□□□□ 0.17
COL11A1P12107 CICP16-201ENST00000502609 2813 ntBASIC16.14■□□□□ 0.17
COL11A1P12107 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.14■□□□□ 0.17
COL11A1P12107 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.14■□□□□ 0.17
COL11A1P12107 AC020910.6-201ENST00000623084 1459 ntBASIC16.14■□□□□ 0.17
COL11A1P12107 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.14■□□□□ 0.17
COL11A1P12107 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.14■□□□□ 0.17
COL11A1P12107 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL11A1P12107 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.14■□□□□ 0.17
COL11A1P12107 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
COL11A1P12107 AC244250.3-201ENST00000620749 366 ntBASIC16.14■□□□□ 0.17
COL11A1P12107 AL451007.2-201ENST00000632004 563 ntBASIC16.14■□□□□ 0.17
COL11A1P12107 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.14■□□□□ 0.17
COL11A1P12107 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
COL11A1P12107 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL11A1P12107 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.13■□□□□ 0.17
COL11A1P12107 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COL11A1P12107 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.13■□□□□ 0.17
COL11A1P12107 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COL11A1P12107 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.13■□□□□ 0.17
COL11A1P12107 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.13■□□□□ 0.17
COL11A1P12107 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.13■□□□□ 0.17
COL11A1P12107 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.13■□□□□ 0.17
COL11A1P12107 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.13■□□□□ 0.17
COL11A1P12107 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
COL11A1P12107 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
COL11A1P12107 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL11A1P12107 BX640514.1-201ENST00000583223 1918 ntBASIC16.13■□□□□ 0.17
COL11A1P12107 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL11A1P12107 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.13■□□□□ 0.17
COL11A1P12107 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
COL11A1P12107 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 AQP7P5-201ENST00000428759 1049 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 AQP7P4-201ENST00000447083 1042 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 AQP7P2-201ENST00000453967 1041 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.12■□□□□ 0.17
COL11A1P12107 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.12■□□□□ 0.17
COL11A1P12107 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.12■□□□□ 0.17
COL11A1P12107 AQP7P3-201ENST00000624547 1041 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 AL109809.1-201ENST00000418979 1367 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FAM90A21P-201ENST00000510875 1396 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FAM90A15P-201ENST00000514465 1395 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FAM90A6P-201ENST00000515148 1394 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms