Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 POM121L8P-201ENST00000417732 1281 ntBASIC14.33□□□□□ -0.12
PCNAP12004 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.33□□□□□ -0.12
PCNAP12004 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.33□□□□□ -0.12
PCNAP12004 POM121L9P-203ENST00000441984 1285 ntBASIC14.33□□□□□ -0.12
PCNAP12004 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 RN7SL48P-201ENST00000579283 293 ntBASIC14.33□□□□□ -0.12
PCNAP12004 AC008735.3-201ENST00000596646 500 ntBASIC14.33□□□□□ -0.12
PCNAP12004 ECM1P1-201ENST00000604092 1279 ntBASIC14.33□□□□□ -0.12
PCNAP12004 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.33□□□□□ -0.12
PCNAP12004 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.33□□□□□ -0.12
PCNAP12004 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 AGGF1P1-201ENST00000509500 2073 ntBASIC14.33□□□□□ -0.12
PCNAP12004 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 AL138725.1-201ENST00000407347 1314 ntBASIC14.33□□□□□ -0.12
PCNAP12004 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCNAP12004 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PCNAP12004 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PCNAP12004 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCNAP12004 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 MBLAC2-202ENST00000514906 1936 ntBASIC14.33□□□□□ -0.12
PCNAP12004 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCNAP12004 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNAP12004 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNAP12004 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.32□□□□□ -0.12
PCNAP12004 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCNAP12004 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNAP12004 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNAP12004 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.32□□□□□ -0.12
PCNAP12004 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 AC005229.1-201ENST00000392885 409 ntBASIC14.32□□□□□ -0.12
PCNAP12004 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.32□□□□□ -0.12
PCNAP12004 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 FTLP10-202ENST00000505798 471 ntBASIC14.32□□□□□ -0.12
PCNAP12004 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.32□□□□□ -0.12
PCNAP12004 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNAP12004 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNAP12004 AC138466.3-201ENST00000619983 221 ntBASIC14.32□□□□□ -0.12
PCNAP12004 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCNAP12004 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCNAP12004 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNAP12004 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNAP12004 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNAP12004 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 INE2-201ENST00000630399 1874 ntBASIC14.31□□□□□ -0.12
PCNAP12004 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms