Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL354702.1-201ENST00000442006 1960 ntBASIC17.17■□□□□ 0.34
TOP1P11387 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 AC006504.5-208ENST00000588784 2401 ntBASIC17.17■□□□□ 0.34
TOP1P11387 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TOP1P11387 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TOP1P11387 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TOP1P11387 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TOP1P11387 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.17■□□□□ 0.34
TOP1P11387 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.17■□□□□ 0.34
TOP1P11387 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 HIST2H2BC-201ENST00000498492 580 ntBASIC17.17■□□□□ 0.34
TOP1P11387 SCARNA21-201ENST00000517026 139 ntBASIC17.17■□□□□ 0.34
TOP1P11387 AC022217.1-201ENST00000521069 738 ntBASIC17.17■□□□□ 0.34
TOP1P11387 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.17■□□□□ 0.34
TOP1P11387 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.17■□□□□ 0.34
TOP1P11387 SNORD3B-2-202ENST00000571722 791 ntBASIC17.17■□□□□ 0.34
TOP1P11387 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TOP1P11387 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.17■□□□□ 0.34
TOP1P11387 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TOP1P11387 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TOP1P11387 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.17■□□□□ 0.34
TOP1P11387 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.17■□□□□ 0.34
TOP1P11387 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TOP1P11387 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 TMBIM7P-202ENST00000641474 1516 ntBASIC17.16■□□□□ 0.34
TOP1P11387 FAM90A7P-201ENST00000382628 1395 ntBASIC17.16■□□□□ 0.34
TOP1P11387 FAM90A23P-201ENST00000400136 1395 ntBASIC17.16■□□□□ 0.34
TOP1P11387 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.16■□□□□ 0.34
TOP1P11387 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.16■□□□□ 0.34
TOP1P11387 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TOP1P11387 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TOP1P11387 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.16■□□□□ 0.34
TOP1P11387 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.16■□□□□ 0.34
TOP1P11387 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.16■□□□□ 0.34
TOP1P11387 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.16■□□□□ 0.34
TOP1P11387 MARK2P5-201ENST00000507649 634 ntBASIC17.16■□□□□ 0.34
TOP1P11387 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.16■□□□□ 0.34
TOP1P11387 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.16■□□□□ 0.34
TOP1P11387 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.16■□□□□ 0.34
TOP1P11387 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.16■□□□□ 0.34
TOP1P11387 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.16■□□□□ 0.34
TOP1P11387 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.16■□□□□ 0.34
TOP1P11387 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
TOP1P11387 ST20-AS1-201ENST00000560255 4223 ntBASIC17.16■□□□□ 0.34
TOP1P11387 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.16■□□□□ 0.34
TOP1P11387 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TOP1P11387 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TOP1P11387 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TOP1P11387 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOP1P11387 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP1P11387 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.15■□□□□ 0.34
TOP1P11387 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP1P11387 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms