Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 AQP7P5-201ENST00000428759 1049 ntBASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 AQP7P4-201ENST00000447083 1042 ntBASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 AQP7P2-201ENST00000453967 1041 ntBASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 AL133467.4-201ENST00000602953 725 ntBASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 AQP7P3-201ENST00000624547 1041 ntBASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 LINC00244-201ENST00000625073 613 ntBASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 MIR600HG-201ENST00000449175 5984 ntBASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSB-PGBD3P0DP91 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 FAU-202ENST00000434372 533 ntTSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 SCARNA12-201ENST00000459155 270 ntBASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSB-PGBD3P0DP91 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.12■□□□□ 0.65
CSB-PGBD3P0DP91 RN7SL23P-201ENST00000484055 275 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms