Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ERBB2P04626 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.31■□□□□ 0.04
ERBB2P04626 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.31■□□□□ 0.04
ERBB2P04626 AC006122.1-201ENST00000493323 440 ntBASIC15.31■□□□□ 0.04
ERBB2P04626 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.31■□□□□ 0.04
ERBB2P04626 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.31■□□□□ 0.04
ERBB2P04626 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.31■□□□□ 0.04
ERBB2P04626 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.31■□□□□ 0.04
ERBB2P04626 AC009884.2-201ENST00000603110 324 ntBASIC15.31■□□□□ 0.04
ERBB2P04626 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.31■□□□□ 0.04
ERBB2P04626 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ERBB2P04626 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.31■□□□□ 0.04
ERBB2P04626 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ERBB2P04626 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.31■□□□□ 0.04
ERBB2P04626 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.31■□□□□ 0.04
ERBB2P04626 AC144522.1-201ENST00000625111 1658 ntBASIC15.31■□□□□ 0.04
ERBB2P04626 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ERBB2P04626 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.31■□□□□ 0.04
ERBB2P04626 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.31■□□□□ 0.04
ERBB2P04626 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
ERBB2P04626 MST1P2-201ENST00000457982 2291 ntBASIC15.31■□□□□ 0.04
ERBB2P04626 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERBB2P04626 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 KRT8P29-201ENST00000420409 1371 ntBASIC15.3■□□□□ 0.04
ERBB2P04626 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 FAM58BP-201ENST00000439056 645 ntBASIC15.3■□□□□ 0.04
ERBB2P04626 ST13P19-201ENST00000442505 1124 ntBASIC15.3■□□□□ 0.04
ERBB2P04626 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 AC021723.1-201ENST00000486306 515 ntBASIC15.3■□□□□ 0.04
ERBB2P04626 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.3■□□□□ 0.04
ERBB2P04626 AL022313.4-201ENST00000562756 2046 ntBASIC15.3■□□□□ 0.04
ERBB2P04626 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.3■□□□□ 0.04
ERBB2P04626 AC104982.3-201ENST00000581995 514 ntBASIC15.3■□□□□ 0.04
ERBB2P04626 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ERBB2P04626 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.3■□□□□ 0.04
ERBB2P04626 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.3■□□□□ 0.04
ERBB2P04626 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.3■□□□□ 0.04
ERBB2P04626 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERBB2P04626 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.3■□□□□ 0.04
ERBB2P04626 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.29■□□□□ 0.04
ERBB2P04626 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERBB2P04626 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERBB2P04626 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.29■□□□□ 0.04
ERBB2P04626 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ERBB2P04626 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERBB2P04626 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERBB2P04626 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms