Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
MT-ND1P03886 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AL138799.1-201ENST00000448213 1675 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AC055876.3-201ENST00000431496 288 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AL589987.1-201ENST00000453380 819 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AC004890.2-204ENST00000481968 304 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 SPDYE18-201ENST00000510091 1050 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AC138649.4-201ENST00000612222 287 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AC004840.1-201ENST00000636359 365 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
MT-ND1P03886 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 AC022144.1-201ENST00000602255 1580 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 AC015688.4-201ENST00000580780 1647 ntBASIC13.86□□□□□ -0.19
MT-ND1P03886 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
MT-ND1P03886 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MT-ND1P03886 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
MT-ND1P03886 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.85□□□□□ -0.19
MT-ND1P03886 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
MT-ND1P03886 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 DRD5P1-201ENST00000456605 1438 ntBASIC13.85□□□□□ -0.19
MT-ND1P03886 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.85□□□□□ -0.19
MT-ND1P03886 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.85□□□□□ -0.19
MT-ND1P03886 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.85□□□□□ -0.19
MT-ND1P03886 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.85□□□□□ -0.19
MT-ND1P03886 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.85□□□□□ -0.19
MT-ND1P03886 RARRES2P5-201ENST00000564013 466 ntBASIC13.85□□□□□ -0.19
MT-ND1P03886 AC036164.1-201ENST00000570544 333 ntBASIC13.85□□□□□ -0.19
MT-ND1P03886 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 AC008738.7-201ENST00000609744 511 ntBASIC13.85□□□□□ -0.19
MT-ND1P03886 AC139530.3-201ENST00000620344 690 ntBASIC13.85□□□□□ -0.19
MT-ND1P03886 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.85□□□□□ -0.19
MT-ND1P03886 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.85□□□□□ -0.19
MT-ND1P03886 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MT-ND1P03886 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms