Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 BEND3P3-201ENST00000611030 2440 ntBASIC11.49□□□□□ -0.57
ZNF253O75346 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.49□□□□□ -0.57
ZNF253O75346 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ZNF253O75346 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.49□□□□□ -0.57
ZNF253O75346 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
ZNF253O75346 AL354702.1-201ENST00000442006 1960 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 AL805961.2-201ENST00000642139 4817 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 HLA-K-203ENST00000430151 1046 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 KLF2P3-201ENST00000451977 1087 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 AC125807.1-201ENST00000483097 614 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 AC067863.1-201ENST00000494933 530 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 AC140878.1-201ENST00000565277 250 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 AL158211.3-201ENST00000607385 239 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 AL603764.1-201ENST00000636452 321 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ZNF253O75346 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 AGGF1P1-201ENST00000509500 2073 ntBASIC11.48□□□□□ -0.57
ZNF253O75346 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
ZNF253O75346 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ZNF253O75346 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
ZNF253O75346 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
ZNF253O75346 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ZNF253O75346 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.47□□□□□ -0.57
ZNF253O75346 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ZNF253O75346 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.47□□□□□ -0.57
ZNF253O75346 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ZNF253O75346 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms