Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 CHMP1AP1-201ENST00000445563 662 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 UPF3AP2-201ENST00000457924 1132 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 SERPINA13P-202ENST00000478994 924 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 CHMP4BP1-201ENST00000556017 588 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 AC106820.3-201ENST00000561653 397 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 MIR3619-201ENST00000579667 83 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 AC016629.1-201ENST00000596579 586 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 AC004466.1-201ENST00000599515 1080 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 AC138627.1-207ENST00000641560 1006 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 AL645728.2-202ENST00000641679 227 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 AC079781.5-202ENST00000641784 3743 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM38O00635 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM38O00635 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 AC018442.1-201ENST00000421439 2061 ntBASIC14.77□□□□□ -0.04
TRIM38O00635 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM38O00635 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM38O00635 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRIM38O00635 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM38O00635 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.77□□□□□ -0.05
TRIM38O00635 AC100850.1-201ENST00000506768 649 ntBASIC14.77□□□□□ -0.05
TRIM38O00635 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 RN7SL190P-201ENST00000582519 257 ntBASIC14.77□□□□□ -0.05
TRIM38O00635 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM38O00635 AC138649.2-201ENST00000615886 705 ntBASIC14.77□□□□□ -0.05
TRIM38O00635 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 AC055811.4-201ENST00000624039 1754 ntBASIC14.77□□□□□ -0.05
TRIM38O00635 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM38O00635 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM38O00635 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIM38O00635 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRIM38O00635 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRIM38O00635 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM38O00635 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRIM38O00635 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRIM38O00635 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TRIM38O00635 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM38O00635 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM38O00635 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM38O00635 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms