Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 AL355864.2-201ENST00000447420 863 ntBASIC11.75□□□□□ -0.53
UPK2O00526 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.75□□□□□ -0.53
UPK2O00526 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.75□□□□□ -0.53
UPK2O00526 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 AC025279.2-201ENST00000569730 653 ntBASIC11.75□□□□□ -0.53
UPK2O00526 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.75□□□□□ -0.53
UPK2O00526 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.75□□□□□ -0.53
UPK2O00526 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
UPK2O00526 RPSAP52-203ENST00000622976 1023 ntBASIC11.75□□□□□ -0.53
UPK2O00526 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 AC064801.2-201ENST00000625052 1303 ntBASIC11.75□□□□□ -0.53
UPK2O00526 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 AC009093.10-201ENST00000641956 1442 ntBASIC11.75□□□□□ -0.53
UPK2O00526 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK2O00526 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
UPK2O00526 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK2O00526 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
UPK2O00526 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
UPK2O00526 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
UPK2O00526 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 AC004945.1-201ENST00000416738 983 ntBASIC11.74□□□□□ -0.53
UPK2O00526 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 TERF1P3-201ENST00000505638 1227 ntBASIC11.74□□□□□ -0.53
UPK2O00526 AC106760.1-201ENST00000508690 800 ntBASIC11.74□□□□□ -0.53
UPK2O00526 AP001889.1-201ENST00000525414 633 ntBASIC11.74□□□□□ -0.53
UPK2O00526 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms