Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 AL354989.2-201ENST00000435838 1540 ntBASIC14.89□□□□□ -0.03
CCDC78A2IDD5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 AC106820.3-201ENST00000561653 397 ntBASIC14.89□□□□□ -0.03
CCDC78A2IDD5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 AC215219.1-201ENST00000400706 1817 ntBASIC14.89□□□□□ -0.03
CCDC78A2IDD5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 MYADML-201ENST00000474610 2147 ntBASIC14.89□□□□□ -0.03
CCDC78A2IDD5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC78A2IDD5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AC136759.1-202ENST00000530858 2194 ntBASIC14.88□□□□□ -0.03
CCDC78A2IDD5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 OR8S1-201ENST00000310194 1080 ntBASIC14.88□□□□□ -0.03
CCDC78A2IDD5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AC016694.1-201ENST00000434179 700 ntBASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AC007551.1-201ENST00000457394 519 ntBASIC14.88□□□□□ -0.03
CCDC78A2IDD5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.88□□□□□ -0.03
CCDC78A2IDD5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC78A2IDD5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms