Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 NKAIN1P1-201ENST00000435754 582 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AL035414.1-201ENST00000451327 857 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 TUBB8P8-201ENST00000458717 1058 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AKR7A2P1-201ENST00000460134 915 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 SCARNA20.5-201ENST00000516991 142 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AL139099.5-201ENST00000635274 300 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AC006504.5-208ENST00000588784 2401 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 BX284668.4-201ENST00000453917 508 ntBASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 BNIP3P13-201ENST00000599968 566 ntBASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 MIR6074-201ENST00000612054 107 ntBASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL4A3BPQ9Y5P4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
COL4A3BPQ9Y5P4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 BCYRN1-201ENST00000418539 200 ntBASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 FNTAP2-201ENST00000430308 634 ntBASIC16.33■□□□□ 0.2
COL4A3BPQ9Y5P4 CALR4P-201ENST00000431943 946 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms