Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FOXA2Q9Y261 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
FOXA2Q9Y261 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
FOXA2Q9Y261 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
FOXA2Q9Y261 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 FO681548.1-201ENST00000455617 1132 ntBASIC11.87□□□□□ -0.51
FOXA2Q9Y261 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 AC106886.1-201ENST00000568660 600 ntBASIC11.87□□□□□ -0.51
FOXA2Q9Y261 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 RN7SL48P-201ENST00000579283 293 ntBASIC11.87□□□□□ -0.51
FOXA2Q9Y261 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 AL162274.1-201ENST00000617191 1098 ntBASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
FOXA2Q9Y261 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC011498.7-201ENST00000624986 2027 ntBASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 TPM3P8-201ENST00000330554 643 ntBASIC11.86□□□□□ -0.51
FOXA2Q9Y261 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 RN7SKP230-201ENST00000365642 335 ntBASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC092933.1-201ENST00000393644 945 ntBASIC11.86□□□□□ -0.51
FOXA2Q9Y261 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC016694.1-201ENST00000434179 700 ntBASIC11.86□□□□□ -0.51
FOXA2Q9Y261 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC245100.3-201ENST00000441281 285 ntBASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.86□□□□□ -0.51
FOXA2Q9Y261 GPR53P-205ENST00000457298 1084 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms