Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 RNA5SP486-201ENST00000515961 83 ntBASIC14.21□□□□□ -0.13
SNX6Q9UNH7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.21□□□□□ -0.13
SNX6Q9UNH7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX6Q9UNH7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.21□□□□□ -0.14
SNX6Q9UNH7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SNX6Q9UNH7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 AC092053.3-201ENST00000641308 4975 ntBASIC14.2□□□□□ -0.14
SNX6Q9UNH7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 PEG13-201ENST00000631594 5667 ntBASIC14.2□□□□□ -0.14
SNX6Q9UNH7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 DMBT1P1-203ENST00000636837 4628 ntBASIC14.2□□□□□ -0.14
SNX6Q9UNH7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 FAM8A4P-201ENST00000435433 1213 ntBASIC14.2□□□□□ -0.14
SNX6Q9UNH7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 GNRHR2-203ENST00000581100 1187 ntBASIC14.2□□□□□ -0.14
SNX6Q9UNH7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 ECM1P1-201ENST00000604092 1279 ntBASIC14.2□□□□□ -0.14
SNX6Q9UNH7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX6Q9UNH7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.19□□□□□ -0.14
SNX6Q9UNH7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms