Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 GUSBP10-201ENST00000417412 665 ntBASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 GOLGA2P8-201ENST00000505201 779 ntBASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 ALG1L13P-202ENST00000519320 584 ntBASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 MIR2392-201ENST00000584881 84 ntBASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AC084781.1-201ENST00000613737 656 ntBASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AC025262.2-201ENST00000623975 1056 ntBASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AC009145.4-201ENST00000625119 1294 ntBASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 LINC00115-201ENST00000473798 1317 ntBASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SYNPO2Q9UMS6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPO2Q9UMS6 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SYNPO2Q9UMS6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.58■□□□□ 0.25
SYNPO2Q9UMS6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPO2Q9UMS6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPO2Q9UMS6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 AC104784.1-201ENST00000473096 294 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms