Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AC018529.2-202ENST00000611482 3087 ntBASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 MIR193BHG-211ENST00000641433 5365 ntBASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 PUDPP3-201ENST00000445368 636 ntBASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 CHMP1AP1-201ENST00000445563 662 ntBASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AP006547.1-201ENST00000563435 692 ntBASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 EEF1DP1-201ENST00000585891 896 ntBASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PARPBPQ9NWS1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 Z93015.1-201ENST00000451718 390 ntBASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.16□□□□□ -0.3
PARPBPQ9NWS1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms