Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 AC026740.1-201ENST00000607068 791 ntBASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 AC009093.10-201ENST00000641956 1442 ntBASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VAT1LQ9HCJ6 AC215219.1-201ENST00000400706 1817 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 AP001267.2-201ENST00000532619 2086 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 LINC00552-201ENST00000625151 2579 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 MYADML-201ENST00000474610 2147 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 SPTLC1P5-201ENST00000450718 252 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 AC006122.1-201ENST00000493323 440 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 RN7SL774P-201ENST00000577467 290 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 AL645939.5-201ENST00000606834 243 ntBASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAT1LQ9HCJ6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAT1LQ9HCJ6 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms